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Course

Whole genome sequencing in AMR surveillance (2025)

Whole genome sequencing in AMR surveillance (2025)

About this course

  • 6 hours study
  • Level 2: Intermediate

Ratings

4.5 out of 5 stars

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You can start learning at any time. By signing up and enrolling you can track your progress and earn a Statement of Participation upon completion, all for free.

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    • General

      • Antimicrobial resistance (AMR) is a major global concern because drug-resistant infections can kill, spread to others, and impose huge costs on individuals and society. In order to tackle this problem we first need to understand it; we can do this by collecting and sharing high-quality data that is relevant to AMR.

        Data relating to AMR means that trends in resistance and antimicrobial use can be monitored and used to make better decisions to help tackle the AMR crisis. As an AMR surveillance professional, you have a key role to play in this surveillance process, whether it is in collecting, analysing or interpreting data, or in using the data to develop new policies and practices.

        This Fleming Fund programme, Tackling antimicrobial resistance, comprises a series of online courses. The aim of this programme is to help you to identify, develop and apply skills and knowledge relevant to your role in order to change and improve your working practice and the practice of people that you work with.

        Whole genome sequencing in AMR surveillance covers the fundamental principles of whole genome sequencing (WGS) and highlights the growing importance of WGS data in providing important policy-relevant insights for AMR surveillance. The course explores why, when and how WGS should be used as part of AMR surveillance, and supports learners to make a compelling case for utilising sequencing hubs or acquiring the necessary equipment to enhance WGS capacity.

  • This course is part of a collection

    This course is part of a collection

    This course is part of a collection of courses called Tackling antimicrobial resistance.... There are 29 courses in this collection so you may find other courses here that maybe of interest to you.

    See this collection

  • Course learning outcomes

    After completing this course, you will be able to:

    • describe the basic principles of WGS
    • explain when, how and why WGS is used in AMR surveillance, and how it complements other types of testing and data to strengthen the AMR surveillance system
    • give examples of how WGS is used in AMR-related surveillance
    • reflect on how increasing WGS capacity could strengthen AMR surveillance in your work
    • recognise the cost and economic advantages of WGS for AMR surveillance and understand the barriers to its implementation
    • outline what is needed to make the case for increasing WGS capacity in your work.

     

  • Course dates:

    First Published 23/05/2025.

    Updated 24/10/2025

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Course Reviews

2 Ratings

2 reviews for this course

This course is rated 4.5

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Course reviews

  • Emmanuel Laurent Mayenga

    Important course

    Emmanuel Laurent Mayenga11 October 2025 3:46

    I found this course to be more useful as it provide basic learnings of WGS technique

  • Emmanuel Okyere Sakyi

    Easy to comprehend

    Emmanuel Okyere Sakyi5 October 2025 8:24

About this course

  • 6 hours study
  • Level 2: Intermediate

Ratings

4.5 out of 5 stars

Sign up to get more

You can start learning at any time. By signing up and enrolling you can track your progress and earn a Statement of Participation upon completion, all for free.

View this course

Sign up to get more

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